hpc

We've installed, two powerful add-on packages for Python.  BioPython is a suite of tools for biological computation and NumPy is a scientific computing package for Python.  Both are available from the default install of Python on the cluster: /opt/exp_soft/python-2.7.2/bin We've…

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We've installed the EMBOSS package which contains a suite of very useful tools for sequence alignment, protein identification, nucleotide pattern analysis and much more.    …

Notification of downtime NB, please read this!: This serves as initial notification of the Sunday 22nd July data centre shut down in 6 weeks time. The ICTS data centres will be shut down completely on Sunday the 22nd of…

We've installed two new software packages, NASP-1.5 and UNAfold 3.8. NASP (Nucleic Acid Structures Predictor) predicts the most probable secondary structures evident within a set of aligned nucleic acid sequences and was written by three UCT researchers, J.Y. Semegni, R.…

Below is a graph of the CPU hours consumed to date on all of our clusters.  We've broken down the usage per department or research group. Below is a breakdown of the SAGrid CPU 13,543 hours performed on the ZA-UCT-ICTS…

The Centre for High Performance Computing will be hosting the 2012 HPC Winter School at the University of Free State and will run from Monday 2 July to Saturday 7 July 2012. Registration ends on the 7 June 2012. More…