{"id":1065,"date":"2011-08-05T13:56:59","date_gmt":"2011-08-05T11:56:59","guid":{"rendered":"http:\/\/oldblogs.uct.ac.za\/blog\/big-bytes\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus"},"modified":"2022-09-26T19:59:53","modified_gmt":"2022-09-26T17:59:53","slug":"deep-sequencing-of-human-papillomavirus","status":"publish","type":"post","link":"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/","title":{"rendered":"Deep sequencing of human papillomavirus"},"content":{"rendered":"<img src=\"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/07\/3625-HPV.png\" alt=\"HPV seq\" border=\"0\" \/>\r\n\r\nHPV infection is causally linked to cervical and other\r\ngenital cancers.\u00a0\u00a0 The human papillomavirus (HPV) research group\r\nat IIDMM, UCT are using next-generation sequencing (NGS) to explore the\r\ndiversity of this virus in HIV infected individuals. NGS is a powerful new\r\ntechnology that allows us to examine viral diversity directly in clinical\r\nspecimens. This technology is transforming the world of genomics, but many\r\nbiologists are struggling to keep up with the analysis of all the data\r\nproduced; both in terms of having the required computing power and the\r\ntechnical know-how.\u00a0 Thanks to the HPC team at ICTS who have set-up several programs for assembling and\r\nanalysing NGS data.\u00a0 We look forward to\r\nexciting results.\r\n\r\nDr. Tracy L. Meiring","protected":false},"excerpt":{"rendered":"<p>     HPV infection is causally linked to cervical and other<br \/>\ngenital cancers.&nbsp;&nbsp; The human papillomavirus (HPV) research group<br \/>\nat IIDMM, UCT are using next-generation sequencing (NGS) to explore the<br \/>\ndiversity of this virus in HIV infected indi&#8230;<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":[],"categories":[4],"tags":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v21.4 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Deep sequencing of human papillomavirus - UCT HPC<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Deep sequencing of human papillomavirus - UCT HPC\" \/>\n<meta property=\"og:description\" content=\"HPV infection is causally linked to cervical and other genital cancers.&nbsp;&nbsp; The human papillomavirus (HPV) research group at IIDMM, UCT are using next-generation sequencing (NGS) to explore the diversity of this virus in HIV infected indi...\" \/>\n<meta property=\"og:url\" content=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\" \/>\n<meta property=\"og:site_name\" content=\"UCT HPC\" \/>\n<meta property=\"article:published_time\" content=\"2011-08-05T11:56:59+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2022-09-26T17:59:53+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/07\/3625-HPV.png\" \/>\n<meta name=\"author\" content=\"Andrew Lewis\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Andrew Lewis\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\"},\"author\":{\"name\":\"Andrew Lewis\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/c183ad1c0a1063124a72d63963ae9c7e\"},\"headline\":\"Deep sequencing of human papillomavirus\",\"datePublished\":\"2011-08-05T11:56:59+00:00\",\"dateModified\":\"2022-09-26T17:59:53+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\"},\"wordCount\":123,\"publisher\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#organization\"},\"articleSection\":[\"hpc\"],\"inLanguage\":\"en-ZA\"},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/08\/05\/deep-sequencing-of-human-papillomavirus\/\",\"name\":\"Deep sequencing of human papillomavirus - 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