{"id":1140,"date":"2011-02-17T22:44:08","date_gmt":"2011-02-17T20:44:08","guid":{"rendered":"http:\/\/oldblogs.uct.ac.za\/blog\/big-bytes\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid"},"modified":"2015-08-14T14:08:08","modified_gmt":"2015-08-14T12:08:08","slug":"north-west-university-za-nwu-reconnected-to-the-grid","status":"publish","type":"post","link":"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/","title":{"rendered":"North West University (ZA-NWU) Reconnected to the Grid"},"content":{"rendered":"Today\r\nSAGrid Core Services resolved a problem with NWU SiteBDII not reporting\r\ncorrectly to the TopBDII. The problem was related to an upgrade\r\nprocedure, not very well documented, between IG release versions. As of\r\nig_15 gLite 3.2, a site is no longer permitted to install a SiteBDII and\r\nComputing Element (CE) on the same machine. The main issue relates to\r\nthe versions of the BDII software. The Computing Element and the\r\nResource Information System no longer utilize the same version of BDII.\r\nTherefore, it is extremely important to read the ig_release notes on\r\nversion upgrades prior to upgrading your enivironment. See the following\r\nURL for these announcements: <a href=\"http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:start\">http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:start<\/a>\r\n\r\nWe started off by investigating log files. The log files for LDAP\r\ninformation on the NWU SiteBDII exists at \/var\/log\/bdii\/bdii-update.log\u00a0 Herewith an extract from the log file:\r\n\r\n<span style=\"font-size: xx-small; font-family: arial,helvetica,sans-serif;\">\u00a0mkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191\r\nmkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf-glue2: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191\r\n<\/span>\r\nThe\r\nuser identifier in which slapd processes are executed was set\r\nto \"root\" and not \"ldap\". You might find however in certain instances that\r\nownership permissions are not set on the respective directories and\r\ncause services to fail, which was the case in NWU Site BDII. The user\r\nidentifier used to be edgusr prior to ig_15 release.\r\n\r\nOnce we assigned the correct permissions we updated the SiteBDII with yaim and almost immediately is appeared in our TopBDII.\u00a0 Additional information regarding the support call can be found at : <a href=\"https:\/\/ops.sagrid.ac.za\/trac\/ticket\/407\">https:\/\/ops.sagrid.ac.za\/trac\/ticket\/407<\/a>","protected":false},"excerpt":{"rendered":"<p>Today<br \/>\n SAGrid Core Services resolved a problem with NWU SiteBDII not reporting<br \/>\n correctly to the TopBDII. The problem was related to an upgrade<br \/>\nprocedure, not very well documented, between IG release versions. As of<br \/>\nig_15 gLite 3.2, a site is no longer permitted to install a SiteBDII and<br \/>\n Computing Element (CE) on the same machine. The main issue relates to<br \/>\nthe versions of the BDII software. The Computing Element and the<br \/>\nResource Information System no longer utilize the same version of BDII.<br \/>\nTherefore, it is extremely important to read the ig_release notes on<br \/>\nversion upgrades prior to upgrading your enivironment. See the following<br \/>\n URL for these announcements: <a href=\"http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:start\">http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:start<\/a><\/p>\n<p>We started off by investigating log files. The log files for LDAP<br \/>\ninformation on the NWU SiteBDII exists at \/var\/log\/bdii\/bdii-update.log&nbsp; Herewith an extract from the log file:<\/p>\n<p><span>&nbsp;mkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191<br \/>&nbsp;mkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf-glue2: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191<br \/><\/span><br \/>The<br \/>\n user identifier in which slapd processes are executed was set<br \/>\nto &#8220;root&#8221; and not &#8220;ldap&#8221;. You might find however in certain instances that<br \/>\n ownership permissions are not set on the respective directories and<br \/>\ncause services to fail, which was the case in NWU Site BDII. The user<br \/>\nidentifier used to be edgusr prior to ig_15 release. <\/p>\n<p>Once we assigned the correct permissions we updated the SiteBDII with yaim and almost immediately is appeared in our TopBDII.&nbsp; Additional information regarding the support call can be found at : <a href=\"https:\/\/ops.sagrid.ac.za\/trac\/ticket\/407\">https:\/\/ops.sagrid.ac.za\/trac\/ticket\/407<\/a><\/p>\n","protected":false},"author":3,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":[],"categories":[15],"tags":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v21.4 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>North West University (ZA-NWU) Reconnected to the Grid - UCT HPC<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"North West University (ZA-NWU) Reconnected to the Grid - UCT HPC\" \/>\n<meta property=\"og:description\" content=\"Today  SAGrid Core Services resolved a problem with NWU SiteBDII not reporting  correctly to the TopBDII. The problem was related to an upgrade  procedure, not very well documented, between IG release versions. As of  ig_15 gLite 3.2, a site is no longer permitted to install a SiteBDII and  Computing Element (CE) on the same machine. The main issue relates to  the versions of the BDII software. The Computing Element and the  Resource Information System no longer utilize the same version of BDII.  Therefore, it is extremely important to read the ig_release notes on  version upgrades prior to upgrading your enivironment. See the following  URL for these announcements: http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:startWe started off by investigating log files. The log files for LDAP  information on the NWU SiteBDII exists at \/var\/log\/bdii\/bdii-update.log&nbsp; Herewith an extract from the log file:&nbsp;mkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191&nbsp;mkdir \/opt\/glite\/var\/cache\/gip\/site-urls.conf-glue2: Permission denied at \/opt\/glite\/libexec\/glite-info-provider-ldap line 191The  user identifier in which slapd processes are executed was set  to &quot;root&quot; and not &quot;ldap&quot;. You might find however in certain instances that  ownership permissions are not set on the respective directories and  cause services to fail, which was the case in NWU Site BDII. The user  identifier used to be edgusr prior to ig_15 release. Once we assigned the correct permissions we updated the SiteBDII with yaim and almost immediately is appeared in our TopBDII.&nbsp; Additional information regarding the support call can be found at : https:\/\/ops.sagrid.ac.za\/trac\/ticket\/407\" \/>\n<meta property=\"og:url\" content=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\" \/>\n<meta property=\"og:site_name\" content=\"UCT HPC\" \/>\n<meta property=\"article:published_time\" content=\"2011-02-17T20:44:08+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2015-08-14T12:08:08+00:00\" \/>\n<meta name=\"author\" content=\"Timothy Carr\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Timothy Carr\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\"},\"author\":{\"name\":\"Timothy Carr\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/41f6cd039836d7741f2b82a7b7cfe8d0\"},\"headline\":\"North West University (ZA-NWU) Reconnected to the Grid\",\"datePublished\":\"2011-02-17T20:44:08+00:00\",\"dateModified\":\"2015-08-14T12:08:08+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\"},\"wordCount\":285,\"publisher\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#organization\"},\"articleSection\":[\"sagrid\"],\"inLanguage\":\"en-ZA\"},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2011\/02\/17\/north-west-university-za-nwu-reconnected-to-the-grid\/\",\"name\":\"North West University (ZA-NWU) Reconnected to the Grid - 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The problem was related to an upgrade  procedure, not very well documented, between IG release versions. As of  ig_15 gLite 3.2, a site is no longer permitted to install a SiteBDII and  Computing Element (CE) on the same machine. The main issue relates to  the versions of the BDII software. The Computing Element and the  Resource Information System no longer utilize the same version of BDII.  Therefore, it is extremely important to read the ig_release notes on  version upgrades prior to upgrading your enivironment. See the following  URL for these announcements: http:\/\/igrelease.forge.cnaf.infn.it\/doku.php?id=doc:updates:ig3_2_64:startWe started off by investigating log files. 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