{"id":2609,"date":"2015-11-21T18:45:31","date_gmt":"2015-11-21T16:45:31","guid":{"rendered":"http:\/\/srvcnthpc001.uct.ac.za\/?p=2609"},"modified":"2015-11-21T18:45:31","modified_gmt":"2015-11-21T16:45:31","slug":"worker-job-submission","status":"publish","type":"post","link":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/","title":{"rendered":"Worker job submission"},"content":{"rendered":"<p>Most clusters have the ability to submit jobs from inside other jobs. Until recently this was disabled on hex. We have now enabled this facility on the series600 nodes. You can now call qsub from inside your job script although the submission limits and criteria remain the same. The advantage here is that a supervisory job can monitor a work flow and farm out other jobs as needed, in addition there is no user delay in the process.<\/p>\n<p>This capability is enabled by default on the SLURM cluster.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Most clusters have the ability to submit jobs from inside other jobs. Until recently this was disabled on hex. We have now enabled this facility on the series600 nodes. You can now call qsub from inside your job script although the submission limits and criteria remain the same. The advantage here is that a supervisory&#8230;<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":[],"categories":[4,5,14],"tags":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v21.4 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Worker job submission - UCT HPC<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Worker job submission - UCT HPC\" \/>\n<meta property=\"og:description\" content=\"Most clusters have the ability to submit jobs from inside other jobs. Until recently this was disabled on hex. We have now enabled this facility on the series600 nodes. You can now call qsub from inside your job script although the submission limits and criteria remain the same. The advantage here is that a supervisory...\" \/>\n<meta property=\"og:url\" content=\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\" \/>\n<meta property=\"og:site_name\" content=\"UCT HPC\" \/>\n<meta property=\"article:published_time\" content=\"2015-11-21T16:45:31+00:00\" \/>\n<meta name=\"author\" content=\"Andrew Lewis\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Andrew Lewis\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\"},\"author\":{\"name\":\"Andrew Lewis\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/c183ad1c0a1063124a72d63963ae9c7e\"},\"headline\":\"Worker job submission\",\"datePublished\":\"2015-11-21T16:45:31+00:00\",\"dateModified\":\"2015-11-21T16:45:31+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\"},\"wordCount\":91,\"commentCount\":0,\"publisher\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#organization\"},\"articleSection\":[\"hpc\",\"SLURM\",\"torque\"],\"inLanguage\":\"en-ZA\",\"potentialAction\":[{\"@type\":\"CommentAction\",\"name\":\"Comment\",\"target\":[\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#respond\"]}]},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\",\"name\":\"Worker job submission - UCT HPC\",\"isPartOf\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#website\"},\"datePublished\":\"2015-11-21T16:45:31+00:00\",\"dateModified\":\"2015-11-21T16:45:31+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#breadcrumb\"},\"inLanguage\":\"en-ZA\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/ucthpc.uct.ac.za\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Worker job submission\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#website\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/\",\"name\":\"UCT HPC\",\"description\":\"University of Cape Town High Performance Computing\",\"publisher\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#organization\"},\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/ucthpc.uct.ac.za\/?s={search_term_string}\"},\"query-input\":\"required name=search_term_string\"}],\"inLanguage\":\"en-ZA\"},{\"@type\":\"Organization\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#organization\",\"name\":\"University of Cape Town High Performance Computing\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/\",\"logo\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-ZA\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/logo\/image\/\",\"url\":\"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/09\/logocircless.png\",\"contentUrl\":\"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/09\/logocircless.png\",\"width\":450,\"height\":423,\"caption\":\"University of Cape Town High Performance Computing\"},\"image\":{\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/logo\/image\/\"}},{\"@type\":\"Person\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/c183ad1c0a1063124a72d63963ae9c7e\",\"name\":\"Andrew Lewis\",\"image\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-ZA\",\"@id\":\"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/image\/\",\"url\":\"https:\/\/secure.gravatar.com\/avatar\/9652c9c73beeab594b8dc2383a880048?s=96&d=mm&r=g\",\"contentUrl\":\"https:\/\/secure.gravatar.com\/avatar\/9652c9c73beeab594b8dc2383a880048?s=96&d=mm&r=g\",\"caption\":\"Andrew Lewis\"},\"sameAs\":[\"http:\/\/blogs.uct.ac.za\/blog\/big-bytes\"]}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Worker job submission - UCT HPC","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/","og_locale":"en_US","og_type":"article","og_title":"Worker job submission - UCT HPC","og_description":"Most clusters have the ability to submit jobs from inside other jobs. Until recently this was disabled on hex. We have now enabled this facility on the series600 nodes. You can now call qsub from inside your job script although the submission limits and criteria remain the same. The advantage here is that a supervisory...","og_url":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/","og_site_name":"UCT HPC","article_published_time":"2015-11-21T16:45:31+00:00","author":"Andrew Lewis","twitter_card":"summary_large_image","twitter_misc":{"Written by":"Andrew Lewis"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#article","isPartOf":{"@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/"},"author":{"name":"Andrew Lewis","@id":"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/c183ad1c0a1063124a72d63963ae9c7e"},"headline":"Worker job submission","datePublished":"2015-11-21T16:45:31+00:00","dateModified":"2015-11-21T16:45:31+00:00","mainEntityOfPage":{"@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/"},"wordCount":91,"commentCount":0,"publisher":{"@id":"https:\/\/ucthpc.uct.ac.za\/#organization"},"articleSection":["hpc","SLURM","torque"],"inLanguage":"en-ZA","potentialAction":[{"@type":"CommentAction","name":"Comment","target":["https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#respond"]}]},{"@type":"WebPage","@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/","url":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/","name":"Worker job submission - UCT HPC","isPartOf":{"@id":"https:\/\/ucthpc.uct.ac.za\/#website"},"datePublished":"2015-11-21T16:45:31+00:00","dateModified":"2015-11-21T16:45:31+00:00","breadcrumb":{"@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#breadcrumb"},"inLanguage":"en-ZA","potentialAction":[{"@type":"ReadAction","target":["https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/ucthpc.uct.ac.za\/index.php\/2015\/11\/21\/worker-job-submission\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/ucthpc.uct.ac.za\/"},{"@type":"ListItem","position":2,"name":"Worker job submission"}]},{"@type":"WebSite","@id":"https:\/\/ucthpc.uct.ac.za\/#website","url":"https:\/\/ucthpc.uct.ac.za\/","name":"UCT HPC","description":"University of Cape Town High Performance Computing","publisher":{"@id":"https:\/\/ucthpc.uct.ac.za\/#organization"},"potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/ucthpc.uct.ac.za\/?s={search_term_string}"},"query-input":"required name=search_term_string"}],"inLanguage":"en-ZA"},{"@type":"Organization","@id":"https:\/\/ucthpc.uct.ac.za\/#organization","name":"University of Cape Town High Performance Computing","url":"https:\/\/ucthpc.uct.ac.za\/","logo":{"@type":"ImageObject","inLanguage":"en-ZA","@id":"https:\/\/ucthpc.uct.ac.za\/#\/schema\/logo\/image\/","url":"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/09\/logocircless.png","contentUrl":"https:\/\/ucthpc.uct.ac.za\/wp-content\/uploads\/2015\/09\/logocircless.png","width":450,"height":423,"caption":"University of Cape Town High Performance Computing"},"image":{"@id":"https:\/\/ucthpc.uct.ac.za\/#\/schema\/logo\/image\/"}},{"@type":"Person","@id":"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/c183ad1c0a1063124a72d63963ae9c7e","name":"Andrew Lewis","image":{"@type":"ImageObject","inLanguage":"en-ZA","@id":"https:\/\/ucthpc.uct.ac.za\/#\/schema\/person\/image\/","url":"https:\/\/secure.gravatar.com\/avatar\/9652c9c73beeab594b8dc2383a880048?s=96&d=mm&r=g","contentUrl":"https:\/\/secure.gravatar.com\/avatar\/9652c9c73beeab594b8dc2383a880048?s=96&d=mm&r=g","caption":"Andrew Lewis"},"sameAs":["http:\/\/blogs.uct.ac.za\/blog\/big-bytes"]}]}},"_links":{"self":[{"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/posts\/2609"}],"collection":[{"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/comments?post=2609"}],"version-history":[{"count":1,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/posts\/2609\/revisions"}],"predecessor-version":[{"id":2610,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/posts\/2609\/revisions\/2610"}],"wp:attachment":[{"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/media?parent=2609"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/categories?post=2609"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/ucthpc.uct.ac.za\/index.php\/wp-json\/wp\/v2\/tags?post=2609"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}