ICTS HPC is very pleased to have played a small role in the development of SKA Squeeze, a data compression algorithm for the SKA radio telescope. Use was made of the GPGPU servers in order to achieve the speeds…
Several sysadmins met today at UWC for the first HPC forum meeting. Represented were UWC, UCT, CHPC, SANBI and the University of Stellenbosch. There was discussion on common schedulers, file systems and supporting technologies. Also several topics for further investigation…
What's up with the yellow warning lights on the cluster?
These nodes have been placed on hold and the reason for us doing this is so that we can 'drain' them of jobs prior to upgrading and patching. We prefer…
We encountered an issue where a user's jobs used far more cpus than allocated. This occured even though ppn was set to 1, the server load went up to 400+ and the individual processes were using up to 4000% CPU…
The eResearch Africa conference hosted by UCT ICTS last week was a resounding success. We had 90 delegates and speakers from 9 countries covering a wide range of eResearch topics. Apart from researchers there were numerous IT system administrators or
Last month we decided to adjust our HPC queues so that jobs by default would land on the correct series. Working under the usual amount of stress and pressure these changes were duly made (by the author) to the queue
One of the frustrations users experience on a cluster made up of large numbers of homogeneous servers is that they often share this space with a diverse population of researchers and software. While it's possible to divide resources into groups
We recently deployed RAxML to our cluster. RAxML (Randomized Axelerated Maximum Likelihood) is a program for sequential and parallel maximum likelihood based inference of large phylogenetic trees. It has 3 different modes of operation: Sequential on one CPU only, MPI
The Association of South African University Directors of Information Technology (ASAUDIT) invites practitioners, researchers, and educators from diverse disciplines to participate in eResearch Africa Conference 2013. Conference participants can opt to present workshops, presentations or posters. For details on